Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., amino acid ABC transporter, permease protein from Phaeobacter inhibens DSM 17395

 Score =  115 bits (288), Expect = 1e-30
 Identities = 72/244 (29%), Positives = 129/244 (52%), Gaps = 24/244 (9%)

Query: 62  LPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFV 121
           L   ++G+  T+ ++L    LA +LG  + +A   +   +R  A  ++++VR IP +V +
Sbjct: 46  LSTLMRGVQLTIFVTLISFFLASLLGLGLALAAGSRWLVIRQGARFYIEVVRGIPIIVLL 105

Query: 122 FIFYFFISNQLIPL-------LGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIG 174
               F ++  L+ L       +GLD           P+ T  F    LW      ++ + 
Sbjct: 106 LYVAFVLAPALVELRNWLGDHIGLD-----------PIRTRNF--PLLWR----AIIALM 148

Query: 175 LLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISL 234
           +  SA+I+E+ RAGL ++ +GQ EAA SLGL  W ++R+++ PQ +  I P L    ++L
Sbjct: 149 IAYSAFISEVFRAGLQSVDEGQIEAAKSLGLSRWHRFRFIVFPQAIRTILPPLGNDFVAL 208

Query: 235 IKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKRSLR 294
           +KD+S++S++ + ++T +G   A  +   FE + +V   YL L + LS+L ++ EK   R
Sbjct: 209 VKDSSLVSVLGVADVTQLGKLTAVGNFRYFETYNVVALIYLTLTIGLSLLLRRFEKHLRR 268

Query: 295 HLSR 298
              R
Sbjct: 269 REER 272