Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Dechlorosoma suillum PS

 Score =  115 bits (289), Expect = 7e-31
 Identities = 70/235 (29%), Positives = 118/235 (50%), Gaps = 21/235 (8%)

Query: 60  GSLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLV 119
           G+LP   +GL  TL ++L  +V+ +  G+L+ +AR      +   A  +V L R++P ++
Sbjct: 11  GALPLLGKGLLVTLEVTLTAIVVGIGWGTLLAVARLSSNRLLSFLAAGYVNLFRSVPLVM 70

Query: 120 FVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSA 179
            +  FY  +   L  L G D                  G  RL    +S ++   L  +A
Sbjct: 71  VILWFYLIVPQALKGLFGQD-----------------IGDIRL----VSALVAFALFEAA 109

Query: 180 YIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTS 239
           Y +EI+RAG+ ++P+GQ  A  +LGL      R V+ PQ    + P L  Q I L +DTS
Sbjct: 110 YYSEIIRAGIQSVPKGQVAAGLALGLTPGQTMRLVVLPQAFRNMIPLLLTQAIILFQDTS 169

Query: 240 IISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKRSLR 294
           ++ +I + +      ++ +  G + E+ L  GAAY V+C T+S L K ++ R ++
Sbjct: 170 LVYVIGLSDFFGTAYKVGDRDGRLVELLLFAGAAYFVICFTVSRLVKHLQARFIK 224