Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Dechlorosoma suillum PS

 Score =  116 bits (290), Expect = 6e-31
 Identities = 72/255 (28%), Positives = 137/255 (53%), Gaps = 23/255 (9%)

Query: 40  IHYQWHWREAWTLIFTPRADGSLPYF---LQGLGATLRLSLWGMVLALVLGSLIGIARSQ 96
           ++Y W+W    ++  TP   G   Y      GL  T+ LSL   V+ALV+GS++G+ R+ 
Sbjct: 1   MNYNWNW----SVFLTPVPSGETTYLGWLFTGLQWTVALSLSAWVIALVVGSIVGVLRTV 56

Query: 97  KAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWL 156
              ++   A  +V+  RN+P LV +F +YF +   L P LG      Y  ++  PL+   
Sbjct: 57  PNRWLSGFAAVYVECFRNVPLLVQLFSWYFVLPELLPPALGN----AYKQSD--PLL--- 107

Query: 157 FGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIA 216
                  +  L+ +LC+GL ++A +AE VRAG+ ++P+GQ  A  ++G      YR+V+ 
Sbjct: 108 -------QQFLAAMLCLGLFTAARVAEQVRAGIESLPRGQRNAGLAMGFTLAQVYRHVLL 160

Query: 217 PQVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLV 276
           P     I P L  + +++ K++++ + I + EL+    ++ + +   +E ++ V   Y+ 
Sbjct: 161 PMAFRIIVPPLTSEFLNIFKNSAVATTIGLIELSRQAQQLVDYTAQPYEAFIAVTLLYVC 220

Query: 277 LCLTLSMLFKQVEKR 291
           + +T+  L +++E++
Sbjct: 221 INVTVMFLMRRLEEK 235