Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  112 bits (281), Expect = 6e-30
 Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 28/234 (11%)

Query: 66  LQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFY 125
           L GL  ++ L++ G+  A  LG   G+ R    W++RLPA  +V+++R IP L+ +F FY
Sbjct: 23  LGGLAMSVVLAIGGIFGAFWLGLGFGLLRLSDRWWLRLPAIIYVEIIRGIPLLMLIFWFY 82

Query: 126 FFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIV 185
           F                        P++       R      S ++   + + AYIAEIV
Sbjct: 83  FLA----------------------PIVL-----GRTLPEAESALVAFIVFTGAYIAEIV 115

Query: 186 RAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSIISLIS 245
           RAG+  +P GQ EAA   GL       YVI PQ L  + P+   Q +SL KDTS+  +I 
Sbjct: 116 RAGVLALPHGQMEAARGTGLSKSQAMIYVILPQALRNMIPSFVNQFVSLTKDTSLAYIIG 175

Query: 246 IQELTFVGSEIANSS-GLIFEIWLIVGAAYLVLCLTLSMLFKQVEKRSLRHLSR 298
           + ELT   ++I N       E++  +   Y ++C TL+   +++E++  R+ +R
Sbjct: 176 VSELTRTATQINNRELTAPAELFFTIAVLYFIVCWTLTAASRRMERQMARYQAR 229