Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  162 bits (410), Expect = 9e-45
 Identities = 92/263 (34%), Positives = 135/263 (51%), Gaps = 31/263 (11%)

Query: 31  WLYYRSEVGIHYQWHWREAWTLIFTPRADGSLPY--FLQGLGATLRLSLWGMVLALVLGS 88
           W+  R      Y W W   W  +FT   DG L     L GLG T+++    + LAL+ G 
Sbjct: 78  WITLRGTAASGYDWQWHRLWRHLFTTAGDGGLRAGPLLDGLGVTVQVVAASLGLALLAGL 137

Query: 89  LIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAE 148
           L  + R   +   R  A A+V+ VRN P L+ +F+ YF ++    P+LGL          
Sbjct: 138 LAALLRQSGSRVGRALAVAYVETVRNTPLLIQLFVVYFVLA----PVLGLGRFA------ 187

Query: 149 VHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTW 208
                              +GVL + L   AYIAEI+RAG+ ++P GQWEA+ SLG+   
Sbjct: 188 -------------------AGVLALSLFEGAYIAEILRAGILSVPTGQWEASRSLGMDVP 228

Query: 209 GKYRYVIAPQVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWL 268
           G Y  V+ PQ      P L GQ +SL+KD+S++S I++ +L      +A  + L+FE+W 
Sbjct: 229 GTYMEVVLPQAARTALPPLTGQLVSLVKDSSLVSTIALHDLAMQAQAVAADTFLVFEVWF 288

Query: 269 IVGAAYLVLCLTLSMLFKQVEKR 291
           +V   YL L L+LS L + +E+R
Sbjct: 289 LVAGMYLALTLSLSALAQLLERR 311