Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  206 bits (524), Expect = 6e-58
 Identities = 122/294 (41%), Positives = 172/294 (58%), Gaps = 20/294 (6%)

Query: 21  LLLAIASLIG-WLYYRSEVGIHYQWHWREAWTLIFTPRADGSLPYFL-----QGLGATLR 74
           LLLA+    G W+Y+++   + YQW+W   W  +      G+   ++     QGL  TLR
Sbjct: 62  LLLALLLCAGAWVYWKAAGRLDYQWNWGVVWQFLLRHDTQGAAGGWVPGTLTQGLLVTLR 121

Query: 75  LSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIP 134
           L LW  +LAL +G+ +G+ R+    F R+ A  +V+ VRN+PPLV VFIF+FF+S+Q  P
Sbjct: 122 LGLWSTLLALCIGTGMGLLRASPRLFRRMVARTYVEGVRNLPPLVLVFIFHFFVSSQFAP 181

Query: 135 LLG------LDELLRYHTAEVH-PLITWL-------FGPARLWENLLSGVLCIGLLSSAY 180
           LL        D +    + +++ P+  WL         P       LSGV+ +GL   AY
Sbjct: 182 LLAGLFAPVADGVAALLSPQLYLPVQDWLARASALLLAPPGQLPVFLSGVVVLGLYEGAY 241

Query: 181 IAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSI 240
           I EIVRAGL  + +GQWEA+ S GL    + R+VI PQ    I P LAGQ IS IKD++I
Sbjct: 242 ITEIVRAGLEGVERGQWEASASTGLTRRQQLRHVILPQAFRLIVPPLAGQFISTIKDSAI 301

Query: 241 ISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKRSLR 294
           +S+ISI+ELTF G E+  ++ L FEIWL V A YL+L  + S+  + VE+R  R
Sbjct: 302 LSVISIRELTFQGMELMAATYLTFEIWLTVAALYLMLTFSCSLAARHVERRLRR 355