Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  114 bits (285), Expect = 2e-30
 Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 27/231 (11%)

Query: 61  SLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVF 120
           S+P  L G+  T+ ++L G+ +  +LG+  G+A++ +    R  A+ +V+ +R  P +V 
Sbjct: 13  SVPLLLGGVHLTIIITLGGLAIGFLLGTATGLAKTARGKLPRALADIYVEAIRGTPLIVQ 72

Query: 121 VFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAY 180
           V   YF +                      PL T +  P      + +G++ I + S AY
Sbjct: 73  VMFLYFGV----------------------PLATGMRIPP-----VTAGIIAIAVNSGAY 105

Query: 181 IAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSI 240
           IAEIVR  + +I  GQ EA  S+GL       YV+ PQ    + P L  Q I  +KDTS+
Sbjct: 106 IAEIVRGAVESIDVGQTEAGRSIGLTRMQTLLYVVWPQAFRRMIPPLGNQFIISLKDTSL 165

Query: 241 ISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291
           + +I + ELT  G EI   +   FE+WL V   YLV+ L+++   +  E++
Sbjct: 166 LVVIGVGELTRQGQEIIAVNFRAFEVWLTVAVMYLVMTLSIARALRVYERK 216