Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., amino acid ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (249), Expect = 3e-26
 Identities = 74/245 (30%), Positives = 115/245 (46%), Gaps = 34/245 (13%)

Query: 51  TLIFTPRADGSLP---YFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANA 107
           T +F+P  D  +      L GL  TL ++ + M+L  VLG    + +    W++R PA  
Sbjct: 7   TSLFSPIGDDGMIGILLILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYIRFPAEL 66

Query: 108 FVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLL 167
           +V ++R  P +V + I YF +      L  LD                        + + 
Sbjct: 67  YVGVIRGTPVVVQLVILYFIV------LAALDV-----------------------DKIT 97

Query: 168 SGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPAL 227
           + ++  GL S AYI+EI+RAG+  + +GQ EAA SLGL      + +I PQ +  I PAL
Sbjct: 98  AAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKLIILPQAIKNILPAL 157

Query: 228 AGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGA-AYLVLCLTLSMLFK 286
             + I L+K+T++I  I   +L   G EI  S      + L   A  YL L  + + +  
Sbjct: 158 GNEFIVLLKETAVIGFIGGVDLMRAG-EIIRSRTFEDSVPLFTCALIYLFLTYSFTFMLS 216

Query: 287 QVEKR 291
           + EKR
Sbjct: 217 KFEKR 221