Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., polar amino acid ABC transporter inner membrane subunit from Klebsiella michiganensis M5al

 Score =  118 bits (295), Expect = 1e-31
 Identities = 82/256 (32%), Positives = 128/256 (50%), Gaps = 36/256 (14%)

Query: 40  IHYQWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAW 99
           +HYQW +   W          +LP  L+GLG TL L L   ++  +LG  +G+ R++   
Sbjct: 1   MHYQWDFSLVWQ---------NLPVLLKGLGVTLELWLLAGIVGTLLGLAVGVVRARGPR 51

Query: 100 FVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGP 159
           F     +AFV++ RN P L+ +  FY+        L+G+    ++ T          FG 
Sbjct: 52  FFYPLTSAFVEVFRNTPVLIQLIWFYYAFP----VLVGI----QFST----------FGA 93

Query: 160 ARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQV 219
           A          L + L ++AY  EI RAGL +I +GQWE A +LG+P     R +I PQV
Sbjct: 94  A---------ALALTLYTAAYSTEIFRAGLQSIERGQWEGAKALGMPPGVMLRRIILPQV 144

Query: 220 LTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCL 279
              + PAL  + I L K TS+ S++++ EL + G  ++++     EI+ +V   Y VL  
Sbjct: 145 FRRMLPALTNRMIELAKVTSLASILTVNELMYQGRLLSSTWYRPVEIFTVVALLYFVLIW 204

Query: 280 TLSMLFKQVEKRSLRH 295
             S L  ++E+R   H
Sbjct: 205 PGSYLAARLERRYRPH 220