Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  140 bits (352), Expect = 5e-38
 Identities = 83/232 (35%), Positives = 132/232 (56%), Gaps = 25/232 (10%)

Query: 66  LQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFY 125
           L+GL  TL +S+  +++ +VLG + G+AR      +R  A  +++++R  P LV VF++Y
Sbjct: 128 LEGLWITLEVSMLAIIIGIVLGVVTGLARISVNPALRWLAITYIEIIRGSPLLVQVFLWY 187

Query: 126 FFIS---NQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIA 182
           F +    N L   +GL  +                    LW     GV+ + + + AY+A
Sbjct: 188 FVVGTLLNALFEKVGLSAI------------------PPLWY----GVMALAIFTGAYVA 225

Query: 183 EIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242
           EIVRAG+ ++ +GQ EAA SLG+      R VI PQ    I P LAGQ ISL+KD+S++ 
Sbjct: 226 EIVRAGIQSVHRGQMEAARSLGMSYAQSMRKVILPQAFRRIMPPLAGQFISLVKDSSLLG 285

Query: 243 LISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKRSLR 294
           +I+++ELT    E+  +S   FE+W++    YLVL  TLS+  + +E+R++R
Sbjct: 286 VIAVRELTKATREVVTTSLQPFELWIVCALLYLVLTFTLSLCVQYLERRAVR 337