Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 82.4 bits (202), Expect = 9e-21
 Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 17/245 (6%)

Query: 14  KTLLTGLLGLAFTLPAVASDTPNLDAIKERGTLRVGM-STFVPWAMRDKQGELIGFEIDV 72
           K LL   + L F+  A+A +            L++G+ + + P+  +D  G+++GF+ D+
Sbjct: 6   KFLLAAAVSLVFSTSAMAVEK-----------LKMGIEAAYPPFNNKDASGQVVGFDKDI 54

Query: 73  AKRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSGVQ 132
              L A    + E V + WDGIIPAL+AKKFD +I  +SV  ER ++V FT PY  + +Q
Sbjct: 55  GDALCAKMKVECEVVTSNWDGIIPALMAKKFDFLISSLSVNDERKQAVDFTDPYYSNKLQ 114

Query: 133 LAANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVIN 192
             A K +   F   ++  K  V  A R       +  E     +   +D    A+ ++ +
Sbjct: 115 FIAPKNV--DFKVDKESLKGKVIGAQRSTLAGTWLEDELGSDITAKLYDTQENAYLDLTS 172

Query: 193 GNAHAVIASSPKPEHESIKHSDSLFLPF-SERLSKGNE-AFAVRLGEEDKKAFFDQWIAD 250
           G   A++A      ++ +K        F  + + +G++ A AVR G ++ +   +  + +
Sbjct: 173 GRVDAILADK-YVNYDWLKTEAGRAYEFKGDPVVEGDKIAIAVRKGNDELRNKLNAALKE 231

Query: 251 RTADG 255
             ADG
Sbjct: 232 ILADG 236