Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., ABC transporter for D-Glucosamine, periplasmic substrate-binding component (from data) from Pseudomonas fluorescens FW300-N2E2

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 69/219 (31%), Positives = 110/219 (50%), Gaps = 14/219 (6%)

Query: 29  AVASDTPNLDAIKERGTLRVGM-STFVPWAMRDKQGELIGFEIDVAKRLAA---DSGWQV 84
           A A+D+  LD++ +RG L VG  ST  PW  +   G+L GF+ID+A+ +A    +   +V
Sbjct: 25  AQAADS-KLDSVLQRGKLIVGTGSTNAPWHFQGADGKLQGFDIDIARMVAKGLFNDPEKV 83

Query: 85  EFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSGV--QLAANKKLAEG 142
           EFV  + D  IP LL  K D+    ++VT  R++ V FT PY   GV   L AN K    
Sbjct: 84  EFVVQSSDARIPNLLTDKVDMSCQFITVTASRAQQVAFTLPYYREGVGLLLPANSK---- 139

Query: 143 FTQLEDFNKR--NVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHAVIA 200
           + ++ED      +V +A  +  +  ++  +  PKA V Q+D     +Q V +G A A   
Sbjct: 140 YKEIEDLKAAGDDVTVAVLQNVYAEELVHQALPKAKVDQYDSVDLMYQAVNSGRADAAAT 199

Query: 201 SSPKPEHESIKHSDSLFLPFSERLSKGNEAFAVRLGEED 239
                ++  +++      P +   S    A AV+ G++D
Sbjct: 200 DQSSVKYLMVQNPGRYRSP-AYAWSPQTYACAVKRGDQD 237