Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., extracellular solute-binding protein, family 3 (NCBI) from Rhodospirillum rubrum S1H

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 62/179 (34%), Positives = 82/179 (45%), Gaps = 11/179 (6%)

Query: 12  SVKTLLTGLLGLAFTLPAVASDTPNLDAIKERG-TLRVGMS-TFVPWAMRDKQGELIGFE 69
           S+K   T L   A  L    + T  L     R  T+R      F P+   D  G+  GF+
Sbjct: 3   SMKKTATALFAAAGILLGGQAVTMALGVADARAETIRFATEGAFPPFNFTDAAGKPQGFD 62

Query: 70  IDVAKRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHS 129
           ID+A  L A    +   V   WDGIIP LLAKK+D II  MS+TPER +SVLFT  Y ++
Sbjct: 63  IDIANALCAQLKAECSMVTQDWDGIIPGLLAKKYDAIIASMSITPERQQSVLFTDAYYNN 122

Query: 130 GVQLAANKKLAEGFTQLEDFNKRNVK---IAARRGAFTVQVARETFPKASVLQFDDDAQ 185
                  K   + F    D +K  +K   I A+R   + Q   +T      L   D A+
Sbjct: 123 QFHFVGPK--GKDF----DLSKAGLKGKAIGAQRATVSSQWIEDTLGDTVSLNLYDTAE 175