Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 87.0 bits (214), Expect = 4e-22
 Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 22/234 (9%)

Query: 10  RFSVKTLLTGLLGLAFTLPAVASDTPNLDAIKERGTLRVGMSTFVPWAMRDKQGELIGFE 69
           R  V T++  L+ LAF   A A +   ++ I          + + P+A  DK G+  GF+
Sbjct: 3   RSFVYTVVMALV-LAFASVAAAEEKTYINGID---------ANYPPFAYVDKDGKPAGFD 52

Query: 70  IDVAKRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHS 129
           +D    +AA  G++V   P  WDGI+P+LLAKK D++  GMS+T  R K + F+ PY   
Sbjct: 53  VDSMNWIAAKMGFKVVHKPMDWDGIVPSLLAKKIDMVCSGMSITDARKKQITFSEPYWTV 112

Query: 130 GVQLAANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKAS---VLQFDDDAQ- 185
                A K   +    ++D  K   K+  +RG       ++  P+      L+F D A  
Sbjct: 113 SQVFVAKK---DSKLSVDDVYKGKKKLGVQRGTSEADALQKQAPEKGWNFELRFYDSAPL 169

Query: 186 AFQEVINGNAHAVIASSPKPEHESIKHSDSLFLPFSERLSKGNEAFAVRLGEED 239
           A ++V+NG   A        E  + K    +   F E      E F V    ED
Sbjct: 170 AIEDVLNGRIDAAGMDILPAEDAAAKKPVKILGTFGE-----PEDFGVATRNED 218