Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  133 bits (334), Expect = 5e-36
 Identities = 90/276 (32%), Positives = 135/276 (48%), Gaps = 26/276 (9%)

Query: 14  KTLLTGLLGLAFTLPAVASDTP-----NLDAIKERGTLRVGMST-FVPWAMRDKQGELIG 67
           + L   ++      PA+A+D        L+ I  RG LRVG    ++P+ M DK G  +G
Sbjct: 5   RLLAAMMMAALLAAPAMAADIELAKKSTLNEIMARGELRVGFDAGYLPFEMTDKNGNYVG 64

Query: 68  FEIDVAKRLAADSGWQVEFVP--TAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAP 125
           F+ID+AK +A   G  V+FVP  T +DG+IPALL+ KFD+II GM+VT ER+  + F  P
Sbjct: 65  FDIDIAKEMARAMG--VKFVPVNTDFDGMIPALLSDKFDIIISGMTVTQERNLKINFADP 122

Query: 126 YSHSGVQLAANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQ 185
           Y   G  +  +KKL       +D N     + +R G    + A+   PKA    FD +A 
Sbjct: 123 YIVVGQTVLLSKKLEGKVKSWKDLNSPEYTVVSRLGTTGEEAAKRMLPKAKFKSFDKEAD 182

Query: 186 AFQEVINGNAHAVIASSP-------KPEHESIKHSDSLFLPFS-ERLSKGNEAFAVRLGE 237
              EV+NG A A +   P       +   + + H D    PF+ E L      F ++ G+
Sbjct: 183 GALEVVNGRADAWVYDMPFNVVFMAEQGKDKVVHLDK---PFTYEPL-----GFGIKKGD 234

Query: 238 EDKKAFFDQWIADRTADGWLQARYEYWFSTLDWQDQ 273
            D   F + ++     DG     Y+ W  + +W+ Q
Sbjct: 235 PDFLNFLNNFMRQIKNDGRYDRIYDKWMRSTEWRSQ 270