Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  239 bits (610), Expect = 5e-68
 Identities = 124/269 (46%), Positives = 164/269 (60%), Gaps = 10/269 (3%)

Query: 13  VKTLLTGLLGLAFTLP-AVASDTPNLDAIKE---------RGTLRVGMSTFVPWAMRDKQ 62
           +++++  LLG+   +  A A+D P  D + E         RGTLRVG STFVPWAM+DK 
Sbjct: 1   MRSIIMTLLGVLMAISVASAADRPLRDQLAEDSVIEQALKRGTLRVGFSTFVPWAMQDKS 60

Query: 63  GELIGFEIDVAKRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLF 122
           G  +GFE+DVA RLA D G  +E VPT W GIIPALL  KFDVIIGGMSV P RS  V F
Sbjct: 61  GAFVGFEVDVATRLAQDLGLNLELVPTKWSGIIPALLTGKFDVIIGGMSVKPVRSLKVNF 120

Query: 123 TAPYSHSGVQLAANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDD 182
           T PY ++ + + A+K  A G   L+DF+   V + AR G+     A++ FPKA +  FDD
Sbjct: 121 TIPYDYASISVMASKSAAAGLKSLDDFDNPEVVVVARTGSTAALAAKKRFPKARLRYFDD 180

Query: 183 DAQAFQEVINGNAHAVIASSPKPEHESIKHSDSLFLPFSERLSKGNEAFAVRLGEEDKKA 242
           +  A QEV++G AHA+++S P P  E + + D LF+P  + L+    AFAVR  + D   
Sbjct: 181 EGPAIQEVLSGRAHALVSSDPLPRFEVLANPDRLFMPEGKPLALEPVAFAVRKSDPDTLN 240

Query: 243 FFDQWIADRTADGWLQARYEYWFSTLDWQ 271
             D WI     +GWL+ R  YWF T DW+
Sbjct: 241 VLDNWIRMVEMEGWLKERKHYWFETRDWE 269