Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., Amino acid ABC transporter, permease protein from Pseudomonas fluorescens FW300-N2E2

 Score =  125 bits (315), Expect = 6e-34
 Identities = 72/213 (33%), Positives = 114/213 (53%), Gaps = 14/213 (6%)

Query: 57  WAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQ 116
           W   L  G  +TL+L  I+++  L L +   + R SR    RAL   YI   R TPLLVQ
Sbjct: 9   WLPKLAQGATLTLELVAIAVLAGLLLAIPLGIARSSRLWQVRALPYAYIFFFRGTPLLVQ 68

Query: 117 IYLLYFVFGPVIGL----------DRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEA 166
           ++L+Y+       +          D F  A   + L   AY AE+ RG + +IP+G+ EA
Sbjct: 69  LFLVYYGLAQFEAVRSSAMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPRGEIEA 128

Query: 167 ARSLGLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSE 226
           AR+LG+SR    + ++LP+  +  LP  +NE++ ++K S++ S + + +LT   R I++ 
Sbjct: 129 ARALGMSRPKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTIIAR 188

Query: 227 TAMPFEIWFSVAAIYLLLTLTL----SALSAWL 255
           T +P EI+F+    YLL++  L      L  WL
Sbjct: 189 TYLPVEIFFAAGMFYLLMSYLLVQGFKQLERWL 221