Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., ABC transporter for D-Glucosamine Hydrochloride, permease component 2 (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  126 bits (317), Expect = 3e-34
 Identities = 74/200 (37%), Positives = 113/200 (56%), Gaps = 1/200 (0%)

Query: 61  LLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLL 120
           LL GL + L L  +S+     +GL  A    S+  V R L + Y+ V+RNTP+LV I L+
Sbjct: 17  LLAGLGLGLSLALVSIAIGCVIGLAMAFALLSKHRVLRVLASVYVTVIRNTPILVLILLI 76

Query: 121 YFVFGPV-IGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFY 179
           YF    + I LD+  + V+ L+L+ GAY  EVFRGGL SI +GQ EA  ++GL  +    
Sbjct: 77  YFALPSLGIRLDKLPSFVITLSLYAGAYLTEVFRGGLLSIHKGQREAGLAIGLGEWQVKA 136

Query: 180 DVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAA 239
            V +P +L+  LP L+N  +SL K++S+ + +A+ +LT   R I  E+    E W    A
Sbjct: 137 YVTVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLVTTA 196

Query: 240 IYLLLTLTLSALSAWLEHKL 259
           +Y+     ++ L  + E +L
Sbjct: 197 LYVAACYLIAMLLRYFEQRL 216