Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., amino acid ABC transporter membrane protein 1, PAAT family from Pseudomonas syringae pv. syringae B728a

 Score =  128 bits (322), Expect = 9e-35
 Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 1/200 (0%)

Query: 61  LLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLL 120
           LL GL + L+L  IS+     +GL  A    SR    R + + Y+ VVRNTP+LV I L+
Sbjct: 17  LLAGLGLGLELALISIAIGCVIGLANAFALLSRYKALRIVASVYVTVVRNTPILVLILLI 76

Query: 121 YFVF-GPVIGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFY 179
           YF   G  I LD+ A+ ++ L+L+ GAY  EVFR GL SI +GQ EA  ++GL  +    
Sbjct: 77  YFALPGLGIRLDKLASFIVTLSLYAGAYLTEVFRAGLLSIHKGQREAGLAIGLGEWQVRA 136

Query: 180 DVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAA 239
            +I+P +L+  LP L+N  +SL K++S+ + +A+ +LT   R I  E+    E W    A
Sbjct: 137 YIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLVTTA 196

Query: 240 IYLLLTLTLSALSAWLEHKL 259
           +Y++    ++ L   LE +L
Sbjct: 197 LYVVACYVIALLLRTLEQRL 216