Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., ABC transporter permease subunit from Synechocystis sp000284455 PCC 6803

 Score =  145 bits (365), Expect = 2e-39
 Identities = 83/207 (40%), Positives = 127/207 (61%), Gaps = 11/207 (5%)

Query: 60  DLLHGLLVTLQLTGISLIFTL--ALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQI 117
           +L  G ++T+ LT  S+ F L    G+  AL+   + L  + +   Y+   R TP+LVQ+
Sbjct: 306 NLFKGSILTVLLTAFSVFFGLIGGTGVAIALISDIKPL--QLIFRIYVEFFRGTPMLVQL 363

Query: 118 YLLYF-------VFGPVIGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSL 170
           +++YF         G  I +DRF  A++AL+L   AY AE+ RGG+ SI QGQ+EA  SL
Sbjct: 364 FIIYFGLPALFKEIGLGITIDRFPAAIIALSLNVAAYLAEIIRGGIQSIDQGQWEACESL 423

Query: 171 GLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMP 230
           G+S + T  +VI PQ  +R LPPL NE ++LIK++S+ +V+   +L  +G+ IV+ T   
Sbjct: 424 GMSPWQTMKEVIFPQAFRRILPPLGNEFITLIKDTSLTAVIGFQELFREGQLIVATTYRA 483

Query: 231 FEIWFSVAAIYLLLTLTLSALSAWLEH 257
           FE++ +VA +YLLLT   S +  WLE+
Sbjct: 484 FEVYIAVALVYLLLTTISSFVFKWLEN 510