Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., L-lysine ABC transporter, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  120 bits (300), Expect = 4e-32
 Identities = 74/209 (35%), Positives = 112/209 (53%), Gaps = 12/209 (5%)

Query: 62  LHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLLY 121
           L GL VTL L   S++    L L  AL R S++ +   L   Y+   R TPL+ Q++L+Y
Sbjct: 63  LSGLGVTLTLVISSILMGAVLSLPVALGRMSKNRLWGWLAYAYVYFFRGTPLITQLFLIY 122

Query: 122 FVFGP------VIGL-----DRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSL 170
           +  G        +GL     D +  A+    L   AY AE+ RG + S+P+GQ E A +L
Sbjct: 123 YGLGSFRPQLETVGLWWFFRDAWNCALFTFTLNTAAYQAEILRGAIESVPRGQREGAAAL 182

Query: 171 GLSRFFTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMP 230
           GL     F+ VILPQ +   L P  NE++ +IK S+IV+++ +FDL  + R   S T   
Sbjct: 183 GLPERVAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGETRRAFSRT-FD 241

Query: 231 FEIWFSVAAIYLLLTLTLSALSAWLEHKL 259
           ++++   A +YLL+   L  +  WLE +L
Sbjct: 242 YQMYIWAAILYLLMVELLRNIWGWLEARL 270