Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., amino acid ABC transporter permease from Pseudomonas fluorescens SBW25-INTG

 Score =  182 bits (462), Expect = 8e-51
 Identities = 98/204 (48%), Positives = 134/204 (65%)

Query: 56  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLV 115
           W  G L+ GL  TL L+ +S I  LA+GL T L R S +   R L T Y+ +VR TPLLV
Sbjct: 112 WALGPLMWGLWTTLWLSVVSGILGLAIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLV 171

Query: 116 QIYLLYFVFGPVIGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRF 175
           QI++ YF  G V+ L R    + AL+LF GAY AE+ R G+ SI +GQ EAARSLGLS  
Sbjct: 172 QIFIFYFFIGTVLNLSREFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSAS 231

Query: 176 FTFYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWF 235
            +   V+LPQ  +R LPPL  + +SL+K++S+VSV+AI +L   GR +++ +  PFEI F
Sbjct: 232 QSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILF 291

Query: 236 SVAAIYLLLTLTLSALSAWLEHKL 259
            VA +YLL+ L LS +++ LE +L
Sbjct: 292 CVAGLYLLINLPLSKMASRLERRL 315