Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  238 bits (608), Expect = 9e-68
 Identities = 122/241 (50%), Positives = 165/241 (68%), Gaps = 1/241 (0%)

Query: 20  VFAGLVWLLDSGAEAMGYTWQWHRVPEYVLIFE-DGEWWAGDLLHGLLVTLQLTGISLIF 78
           +   L W+   G  A GY WQWHR+  ++     DG   AG LL GL VT+Q+   SL  
Sbjct: 72  LLGALTWITLRGTAASGYDWQWHRLWRHLFTTAGDGGLRAGPLLDGLGVTVQVVAASLGL 131

Query: 79  TLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLLYFVFGPVIGLDRFATAVL 138
            L  GL  ALLRQS S VGRAL   Y+  VRNTPLL+Q++++YFV  PV+GL RFA  VL
Sbjct: 132 ALLAGLLAALLRQSGSRVGRALAVAYVETVRNTPLLIQLFVVYFVLAPVLGLGRFAAGVL 191

Query: 139 ALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLTNEM 198
           AL+LF+GAY AE+ R G+ S+P GQ+EA+RSLG+    T+ +V+LPQ  +  LPPLT ++
Sbjct: 192 ALSLFEGAYIAEILRAGILSVPTGQWEASRSLGMDVPGTYMEVVLPQAARTALPPLTGQL 251

Query: 199 VSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWLEHK 258
           VSL+K+SS+VS +A+ DL  Q + + ++T + FE+WF VA +YL LTL+LSAL+  LE +
Sbjct: 252 VSLVKDSSLVSTIALHDLAMQAQAVAADTFLVFEVWFLVAGMYLALTLSLSALAQLLERR 311

Query: 259 L 259
           L
Sbjct: 312 L 312