Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., amino acid ABC transporter permease from Methanococcus maripaludis JJ

 Score =  134 bits (336), Expect = 2e-36
 Identities = 74/202 (36%), Positives = 122/202 (60%), Gaps = 4/202 (1%)

Query: 61  LLHGLLVTLQLTGISLIFTLALGLTTALLRQSR-SLVGRALGTGYIAVVRNTPLLVQIYL 119
           ++  + VTL++T +S + ++ + +    +R    S     +   Y+ V R TPLL+Q++ 
Sbjct: 13  IIDAVFVTLKITIMSFLLSVIIAVLVGSIRAMNFSKTLDLVLMAYVEVFRGTPLLIQLFF 72

Query: 120 LYFVFGPVIGLDRFAT--AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFT 177
           +Y+   P +G+    T  AVL L+L  GAY +E+ R  + S+P GQ+EAA SLG+ +  +
Sbjct: 73  IYYGL-PSVGITMSGTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEAAESLGMGKIES 131

Query: 178 FYDVILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSV 237
              ++LPQ  + T+PPL N   S++K SS++SV+AI +LT  G+ I + T+ PFEI+ ++
Sbjct: 132 MVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIYTRTSRPFEIYLTI 191

Query: 238 AAIYLLLTLTLSALSAWLEHKL 259
             IYLLL   +S  S  +E KL
Sbjct: 192 GLIYLLLVSIISISSWKIEKKL 213