Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., amino acid ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  130 bits (326), Expect = 3e-35
 Identities = 71/199 (35%), Positives = 115/199 (57%)

Query: 61  LLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLL 120
           +L+GL VTL +T  +++    LG+ T L++ S     R     Y+ V+R TP++VQ+ +L
Sbjct: 24  ILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYIRFPAELYVGVIRGTPVVVQLVIL 83

Query: 121 YFVFGPVIGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYD 180
           YF+    + +D+   A++A  L  GAY +E+ R G+ ++ +GQ EAARSLGLS+  T   
Sbjct: 84  YFIVLAALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKL 143

Query: 181 VILPQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAI 240
           +ILPQ ++  LP L NE + L+K ++++  +   DL   G  I S T       F+ A I
Sbjct: 144 IILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALI 203

Query: 241 YLLLTLTLSALSAWLEHKL 259
           YL LT + + + +  E +L
Sbjct: 204 YLFLTYSFTFMLSKFEKRL 222