Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  158 bits (400), Expect = 9e-44
 Identities = 81/196 (41%), Positives = 129/196 (65%)

Query: 64  GLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLLYFV 123
           G+LVT Q+T  S+I ++ +GL T L R SR+     + + Y+ VVR  PLLVQ++ +Y+ 
Sbjct: 55  GILVTFQVTVFSIICSIPIGLITGLGRLSRNRGINLVASTYVEVVRGIPLLVQLFYIYYA 114

Query: 124 FGPVIGLDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVIL 183
            G  + +     A++AL++  GAY  EVFR G+ +IP+GQ EAARSLG +R  T + V+L
Sbjct: 115 LGRFLKVPDMLAAIIALSVCYGAYMGEVFRAGIEAIPKGQTEAARSLGFNRVETMFLVVL 174

Query: 184 PQLLQRTLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLL 243
           PQ  +  LPP+ NE ++++K++S+VS++A+ D+  +GR   SE+   FE +  +A +YLL
Sbjct: 175 PQAWRTILPPVGNEFIAMLKDTSLVSIIAVADILRRGREFASESFQYFETYTMIALVYLL 234

Query: 244 LTLTLSALSAWLEHKL 259
           +TL LS   + +E +L
Sbjct: 235 ITLLLSKGVSIMEARL 250