Pairwise Alignments

Query, 266 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  216 bits (550), Expect = 4e-61
 Identities = 113/250 (45%), Positives = 160/250 (64%), Gaps = 5/250 (2%)

Query: 15  LQMMLVFAGLVWLLDSGAEAMGYTWQWHRVPEYVLIFE-----DGEWWAGDLLHGLLVTL 69
           L  + +  G + ++  GA   GY WQW+R   ++ +       +G   AG LL GL VTL
Sbjct: 18  LAYVALMGGFLTVVVHGASQSGYVWQWYRAWRFLFVLPGDAGAEGGASAGLLLQGLGVTL 77

Query: 70  QLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQIYLLYFVFGPVIG 129
           Q+   SL+  L L      LR S    GR +   Y+  VRNTPLLVQ+++ YF   PV G
Sbjct: 78  QVAAGSLVLALLLAAVAVALRLSCLRTGRLVARLYVESVRNTPLLVQLFVTYFAIAPVFG 137

Query: 130 LDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQR 189
           L R A+AV+AL +F+GAY AE+ R G+ ++PQGQ+EA+RSLG+    T+  VILPQ L+R
Sbjct: 138 LGRMASAVMALGVFEGAYMAEILRAGIAAVPQGQWEASRSLGMDEPGTYVQVILPQALRR 197

Query: 190 TLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLS 249
            LPPLT + VSL+K+SS+ S +AI +LT Q + I++ET + FE+W   AAIYL +TL+LS
Sbjct: 198 ALPPLTGQAVSLVKDSSLASAIAIHELTMQAQTIIAETFLTFEVWLLTAAIYLCVTLSLS 257

Query: 250 ALSAWLEHKL 259
           A++  LE ++
Sbjct: 258 AVARLLERRM 267