Pairwise Alignments

Query, 239 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., amino acid ABC transporter ATP-binding protein from Methanococcus maripaludis S2

 Score =  254 bits (649), Expect = 1e-72
 Identities = 131/244 (53%), Positives = 175/244 (71%), Gaps = 9/244 (3%)

Query: 3   VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
           +IE   + K + +   LK + L V KGE++VI GPSGSGKSTL+R +NGLE    G I  
Sbjct: 1   LIEMVNIHKKFKEAHVLKGVDLKVAKGEVLVIVGPSGSGKSTLLRCINGLEKTTEGHIFF 60

Query: 63  LPELDERTRRS-------GKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAKERAY 115
             E D+ T +         KIGMVFQ FNLFPHLTVL+N+T AP + L +S +EA+E A 
Sbjct: 61  --EGDDITDKKVNINKIRQKIGMVFQQFNLFPHLTVLDNITFAPRKVLNVSKKEAEELAR 118

Query: 116 HFLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVLEV 175
             L++V +  + ++YPIQLSGGQQQRVAIAR+L M+P+ +LFDEPTSALDPE + EVL+V
Sbjct: 119 ELLKKVGLEGKENQYPIQLSGGQQQRVAIARALAMKPDAMLFDEPTSALDPELVKEVLDV 178

Query: 176 MVDLAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTHPRTQQFLNQ 235
           M  LA +G+TM+ VTHEMGFA++V  R++F+D+G+ILE G+P  +F NP + RT+ F  +
Sbjct: 179 MKQLAYEGMTMVVVTHEMGFAKEVGDRLIFIDDGQILEDGNPSDVFSNPKNERTKNFFGK 238

Query: 236 ILSH 239
           ILSH
Sbjct: 239 ILSH 242