Pairwise Alignments

Query, 350 a.a., 3-deoxy-7-phosphoheptulonate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) from Shewanella amazonensis SB2B

 Score =  347 bits (891), Expect = e-100
 Identities = 174/348 (50%), Positives = 240/348 (68%), Gaps = 5/348 (1%)

Query: 5   DDVKIKKIKELLPPVAVLEKFPATETASSTTFQAREAIHNMLQDKDDRLLVVIGPCSIHD 64
           ++V I   K L+ P  +  + P +E       ++R  + +++  +D RLLVV GPCSIHD
Sbjct: 7   NNVHISAEKVLITPQELKRELPLSEHGYQYILRSRRTVADIVHKRDPRLLVVAGPCSIHD 66

Query: 65  PKAAIEYGQRLKALRDELSGQLEIVMRVYFEKPRTTVGWKGLINDPYLNDTYEINDGLRM 124
             AA EY  +LK L DEL  +  I+MRVYFEKPRTTVGWKG+INDP +++++++  GLR+
Sbjct: 67  IAAAKEYALKLKKLHDELKDEFFILMRVYFEKPRTTVGWKGMINDPDMDESFDVEKGLRL 126

Query: 125 GRKLLLDLTDMGMPTASEFLDMITPQYVADLISWGAIGARTTESQVHRELASGLSCPVGF 184
            R+L++ L ++ +P A+E LD I+PQY+++L++W AIGARTTESQ HRE+ASGLS PVGF
Sbjct: 127 ARELMIFLAELELPVATEALDPISPQYISELVTWSAIGARTTESQTHREMASGLSMPVGF 186

Query: 185 KNGTDGNIKIASDAIRSAGASHHFLSVTKFGHSAIVETAGNPDCHIILRGGKEPNYSAAH 244
           KNGTDG + +A +A++SA + H F+ + + G  A+++T GNPD HIILRGG +PNY A  
Sbjct: 187 KNGTDGKLDVAINAMKSAASGHRFMGINQQGQVALLQTNGNPDGHIILRGGSKPNYDAES 246

Query: 245 VSNIKQELEVAGLPQKVMIDFSHANSSKQFKRQMVVAEDVAAQIAQGEHAIFGVMIESHL 304
           V+  + ++  AGL  K++ID SH NSSK   RQ  V  DV AQ+A G  AI GVM+ESHL
Sbjct: 247 VAECEAQVRWAGLDPKLVIDCSHGNSSKDHNRQDPVCRDVFAQVAAGSDAIIGVMLESHL 306

Query: 305 VEGRQDL-TPGCNLTYGQSITDACIGWEDTETVLRQ----LAAAIEAR 347
             G Q    P   L YG S+TDACI W+ TET+LR+    LA+ I +R
Sbjct: 307 NAGNQPCDKPLSELKYGVSVTDACIDWQTTETLLREGAENLASVIPSR 354