Pairwise Alignments

Query, 350 a.a., 3-deoxy-7-phosphoheptulonate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) from Shewanella loihica PV-4

 Score =  357 bits (916), Expect = e-103
 Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 1/341 (0%)

Query: 5   DDVKIKKIKELLPPVAVLEKFPATETASSTTFQAREAIHNMLQDKDDRLLVVIGPCSIHD 64
           ++V I   K L+ P  + ++ P +  A      AR  + +++  +D+R+LVV GPCSIHD
Sbjct: 7   NNVHISSEKVLVTPEELKQQLPLSTAAYHYVLNARRTVSDIVHKRDNRVLVVSGPCSIHD 66

Query: 65  PKAAIEYGQRLKALRDELSGQLEIVMRVYFEKPRTTVGWKGLINDPYLNDTYEINDGLRM 124
             +A EY  RLK L DEL  +  I+MRVYFEKPRTTVGWKG+INDP +++++++  GLR 
Sbjct: 67  IASAKEYALRLKTLHDELKDEFYILMRVYFEKPRTTVGWKGMINDPDMDESFDVEKGLRQ 126

Query: 125 GRKLLLDLTDMGMPTASEFLDMITPQYVADLISWGAIGARTTESQVHRELASGLSCPVGF 184
            R+L++ L ++G+P A+E LD I+PQY+++L++W AIGARTTESQ HRE+ASGLS PVGF
Sbjct: 127 ARELMIWLAELGLPVATEALDPISPQYISELVTWSAIGARTTESQTHREMASGLSMPVGF 186

Query: 185 KNGTDGNIKIASDAIRSAGASHHFLSVTKFGHSAIVETAGNPDCHIILRGGKEPNYSAAH 244
           KNGTDG + +A +A++SA +SH F+ + + G  A+++TAGNPD H+ILRGGK PNY A+ 
Sbjct: 187 KNGTDGKLGVAINALQSAASSHRFMGINQAGQVALLQTAGNPDGHVILRGGKTPNYDASS 246

Query: 245 VSNIKQELEVAGLPQKVMIDFSHANSSKQFKRQMVVAEDVAAQIAQGEHAIFGVMIESHL 304
           V+  +Q+L  A L  ++++D SH NSSK   RQ  V +DV  QIA G  +I GVM+ESHL
Sbjct: 247 VAECEQQLHAAKLNARLVVDCSHGNSSKDHTRQPSVCQDVFDQIANGNKSIIGVMLESHL 306

Query: 305 VEGRQDL-TPGCNLTYGQSITDACIGWEDTETVLRQLAAAI 344
            EG Q    P   L YG S+TDACI W+ TE +LRQ AA +
Sbjct: 307 NEGNQSSDKPMSELAYGVSVTDACIDWQTTEDLLRQGAAQL 347