Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  212 bits (539), Expect = 4e-59
 Identities = 158/527 (29%), Positives = 270/527 (51%), Gaps = 17/527 (3%)

Query: 137 VNALAQRRKLEIAFIRLEDTYQWAADLLLQQSSGQRSMRNKAELITSGIARDLKNIRRAD 196
           V AL Q   +  + + +E   QW   +       +  +R +   +   + +D KNI  A 
Sbjct: 28  VFALGQMSSIRDSEVAVET--QWLPSIRGGDEIREWMLRIRTISLRMALDQDPKNI--AV 83

Query: 197 AKTDLNELEKVLSKDIEMARKRLDRVLVPDDVKARY--IANLNRLQELALGQNGLLATMR 254
            +  ++  +K LS+ I    K    ++V  + KA Y             + Q+  LA   
Sbjct: 84  YRGQMDTRDKELSEKIAAYEK----LVVTPEGKALYDQFKQTFAAYRTGIAQSFTLAEQG 139

Query: 255 KAQQLENALLIQNQQVDASLASSLAKLDDMAK-YAGSIAQQSRMLADAAVSSANFWIMAV 313
           +  +L   LL+  + V   +  S  +L+D+A+ ++  ++ +S+   +   +S    ++++
Sbjct: 140 RRDELIKLLLVDMKTV---VDGSGKQLNDLAELFSKQVSIESQKSQEHYANSR--MVVSL 194

Query: 314 SAISAAVALV-IGYTTARSIQKPLQKINHELAYMARGDMTRRINYPTRCEFGALSRSIDI 372
             + AA+A V +     RSI KPL +  +    +ARGD+TR I      E   L +++  
Sbjct: 195 FVVFAALATVALAMLLTRSIVKPLGEALNAAENVARGDLTRPIETHGNDEVSRLLKALAA 254

Query: 373 LADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQVAAAITELEVSATE 432
           +     E L  I+  +  L   A     ++  +   +Q+Q ++ +Q A A+TE+  +  E
Sbjct: 255 MQQNLRETLQGISGSAAQLATAADELNAVTLDSTQSLQQQNNEIEQAATAVTEMTTAVEE 314

Query: 433 VARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIGSI 492
           VAR+     D   ++   A  G+Q+V+ T      LASD++   G+   L   S +IG +
Sbjct: 315 VARNAVSTSDATRQSSESASLGQQRVSDTVDAIGALASDVQVTGGLVQSLANQSQDIGKV 374

Query: 493 LDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENL 552
           LDVIR IAEQTNLLALNAAIEAARAG++GRGFAVVADEVRALA RTQ ST+EI+ M++ +
Sbjct: 375 LDVIRAIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAYRTQQSTQEIEQMVQGM 434

Query: 553 QESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVS 612
           +  + Q ++ M  S  +  + +        ALQ+I   +  I E    +A AA+EQ  V+
Sbjct: 435 RSGATQALDSMQASSSRAASTLAMAERAGDALQTITASVNEIHERNLVIASAAEEQAQVA 494

Query: 613 QSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFKV 659
           + V  ++  I +++  +   A ++++SS  L+ LA   + ++  F+V
Sbjct: 495 REVDRNLVNIRDLSVRSASGADQTSASSHELSQLANSLRTMVQRFQV 541