Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  220 bits (561), Expect = 1e-61
 Identities = 129/360 (35%), Positives = 201/360 (55%)

Query: 300 DAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARGDMTRRINYPT 359
           DA  +SA   +  V+A++  +  +  +   + I  PLQ     +  +ARGD++  +    
Sbjct: 159 DADAASAKVLLGLVAAMTLLLGALAAWIITQQIVNPLQYTLQAVNRIARGDLSEPVQVNR 218

Query: 360 RCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQV 419
           R E G L   +  +     EL+  I +G   + + A + + ++E+  A V  QK++TD V
Sbjct: 219 RDELGQLQSGLQQMMLNLHELIEGIRSGVIQVASAAEQLSAVTEQTNAGVNNQKTETDHV 278

Query: 420 AAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGIT 479
           A A++E+  +   VAR  + A      AD +A +G Q V       ++LA ++  +    
Sbjct: 279 ATAMSEMTATVQNVARDAEEASTAASAADQQASEGEQIVNEAIAQIKRLAEELNQSADAV 338

Query: 480 HKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQ 539
             L E S  IG +LDVI+ +A+QTNLLALNAAIEAARAG+AGRGFAVVADEVR+LA RTQ
Sbjct: 339 RHLQEQSEKIGGVLDVIKAVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLALRTQ 398

Query: 540 TSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMAD 599
            STEEI+ ++  +Q  +  V   M  SQ    + VE T     AL++I  ++  I+ M  
Sbjct: 399 RSTEEIESLVAGVQSGTHAVASGMESSQLLGESSVEFTHRAVIALENITSKVSIIQAMNQ 458

Query: 600 QVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFKV 659
           Q+A AA++Q  V++ +   V  + +++ +T     E+ASSS  LA L  + ++L+  FKV
Sbjct: 459 QIATAAEQQSAVAEEINRSVINVRDISEQTASTCEETASSSTELARLGHELERLVGRFKV 518