Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  199 bits (505), Expect = 4e-55
 Identities = 125/351 (35%), Positives = 196/351 (55%), Gaps = 7/351 (1%)

Query: 311 MAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARG--DMTRRINYPTRCEFGALSR 368
           +AV+AI+  ++L+I     + + +PL  +   +  +A+G  D+TRR+    + EF  L  
Sbjct: 281 VAVAAIALLLSLLI-----QVLMRPLTTMGRAMQDIAQGEGDLTRRLVVQGKDEFAVLGG 335

Query: 369 SIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQVAAAITELEV 428
           S +   ++    +S++++ +R + + + R    S  ++    EQ ++T+ VAAAI +L  
Sbjct: 336 SFNQFVERIHASISEVSSATRQVHDLSQRVMTSSNASLVGSDEQSARTNSVAAAINQLGA 395

Query: 429 SATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSNN 488
           +  E+AR+   A      A  +A  GRQ V  T +   +L+  +  +      L   ++N
Sbjct: 396 ATQEIARNAADASQHASGASEQADDGRQVVEKTIQAMTELSQKISLSCTQIETLNASTDN 455

Query: 489 IGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHM 548
           IG ILDVI+GI++QTNLLALNAAIEAARAG+AGRGFAVVADEVR LA RTQ S EEI  M
Sbjct: 456 IGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKM 515

Query: 549 IENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQ 608
           I +LQ  S++ V  M  SQ  +   VE   +    L S+  R+G I  M   VA A +EQ
Sbjct: 516 ITSLQVGSREAVTTMNASQTSSEESVEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQ 575

Query: 609 IVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFKV 659
             V +++   V+ I  +  ++     E+    + L+  A + +QL+  FK+
Sbjct: 576 TAVVETLNMDVSHINLLNQQSVANLNETLKDCDALSQQANRLKQLVDSFKI 626