Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  192 bits (488), Expect = 4e-53
 Identities = 128/365 (35%), Positives = 197/365 (53%), Gaps = 7/365 (1%)

Query: 297 MLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARG--DMTRR 354
           ML++   S+    ++AV  I A + ++I     R + +PL  +   +  +A G  D+TRR
Sbjct: 267 MLSEFRTSALIAMVIAVVFIIALLGMLI-----RVLMQPLLTMGRAMHDIAEGEGDLTRR 321

Query: 355 INYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKS 414
           +      EFGAL  S +   ++    + ++ + +  +   A R    S  +M    +Q S
Sbjct: 322 LVIHGHDEFGALGTSFNRFVERIHTSIREVASATGQVNEVALRVVSASNSSMFNSDQQAS 381

Query: 415 QTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMES 474
           +T  VAAAI +L  +A E+A++   A      A + A+ G+Q V  T    +QL++ +  
Sbjct: 382 RTSSVAAAINQLGAAAQEIAQNAALASQHSSDARSLAEDGQQVVDKTIAAMQQLSAKISD 441

Query: 475 AVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRAL 534
           + G    L   + NIG IL+VI  I++QTNLLALNAAIEAARAG+AGRGFAVVADEVR L
Sbjct: 442 SCGNIETLNSNTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNL 501

Query: 535 ATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAI 594
           A RTQ S +++Q MIE LQ  +++ V  M  SQ Q+ + V    +    L S+  R+G I
Sbjct: 502 AHRTQDSAQQVQKMIEELQVGAREAVLTMTDSQRQSESSVGIANQAGERLGSVTQRIGEI 561

Query: 595 KEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLI 654
             M   VA A +EQ  V +S+   +T I  +  E     + +  +   L   AA+ +QL+
Sbjct: 562 DGMNQSVATATEEQTAVVESINVDITEINTLNQEGVENLQATLRACADLEQQAARLKQLV 621

Query: 655 AHFKV 659
             F++
Sbjct: 622 GSFRI 626