Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  217 bits (552), Expect = 1e-60
 Identities = 141/471 (29%), Positives = 248/471 (52%), Gaps = 9/471 (1%)

Query: 193 RRADAKTDLNELEKVLSKDIEMARKRLDRVLVPDDVKARYIANLNRLQELALGQNGLLA- 251
           R  D +    +L +  S+ I  A+   ++++   D +A Y    ++L +L LGQ   L  
Sbjct: 71  REPDIQQKTYDLVEQRSQQIRAAQTTYEKLISASDERAAY----DQLVQL-LGQYRQLEE 125

Query: 252 ---TMRKAQQLENALLIQNQQVDASLASSLAKLDDMAKYAGSIAQQSRMLADAAVSSANF 308
              T+ +  Q++    + N ++ ++  +  A +D + +     A+     A    SSA  
Sbjct: 126 RMKTLSRNNQVDELRALLNTELLSNSDAINAAIDRLVEINNLQAEALNKGAAQQYSSAFN 185

Query: 309 WIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARGDMTRRINYPTRCEFGALSR 368
           W++ +  I+  + L+  +    SI KP+         +A+G++TR I      E G L R
Sbjct: 186 WVVTLLLIATGLTLLFAWLLTNSITKPIANALDAAEEIAKGNLTRPITVDGSDEAGRLLR 245

Query: 369 SIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQVAAAITELEV 428
           ++  + +K  + L +I+  +  L + A     +++ +   + +Q ++ +Q A A+ E+  
Sbjct: 246 AMSTMQEKLRDTLQRISGSATQLASAAEELNSVTDESARGLTQQNNEIEQAATAVNEMTS 305

Query: 429 SATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSNN 488
           +  EVAR+     +    A   A  GR  V  T    E++++D++S   +   L + S +
Sbjct: 306 AVEEVARNAVSTSEASKNATTSAGDGRDLVQETVSAIERMSADVQSTAALIGNLADESRD 365

Query: 489 IGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHM 548
           IG +LDVIRG+A+QTNLLALNAAIEAARAG+AGRGFAVVADEVRALA RTQ ST EI+ M
Sbjct: 366 IGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERM 425

Query: 549 IENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQ 608
           I ++Q  ++  V+ M  S E+  + +   R    +L +I   +  I E    +A AA+EQ
Sbjct: 426 IGSIQSGTEHAVDSMRNSTERAESTLNIARGAGMSLDTINTAIVEINERNLVIASAAEEQ 485

Query: 609 IVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFKV 659
             V++ V  ++  I +++ ++   A +++++S  L+ LA     ++  F +
Sbjct: 486 AQVAREVDRNLVNIRDLSVQSATGANQTSAASAELSRLAVDLNNMVGRFSL 536