Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  237 bits (605), Expect = 1e-66
 Identities = 207/686 (30%), Positives = 339/686 (49%), Gaps = 82/686 (11%)

Query: 3   LSIVQRIIAGFVLMLLLLILLGVISTLKIRGINDGLSEVSDRATPLVMAVAGLKEALQES 62
           +S++ ++  GF ++L L  +L       +      + + +DR T    ++  L   L   
Sbjct: 8   MSVMLKLALGFAVVLFLTAILAATGWTSL----GKMIQRADRMT----SITELGNRLDHL 59

Query: 63  NRWVLEFRTS---EEAGELPQLSNKFKDQQARFRQLSQQMNALTDSTESQKQFQDVLQAT 119
            R  L+++     E+ GEL Q S   +   A+ + L+ ++       E+ K+   + QA+
Sbjct: 60  RRARLQYQVDKGDEQKGELIQAS--LEQFVAKQKSLANELK----KPENLKKLALIEQAS 113

Query: 120 NQFYSQADQVLTQHSEWVNALAQRRKLEIAFIRLEDTYQWAADLLLQQSSGQRSMRNKAE 179
            ++                        ++A   + + Y+   D  +++  G  +++  A 
Sbjct: 114 TEY------------------------QVALNTMREAYR--TDAAMRKEMGVNAVKGAA- 146

Query: 180 LITSGIARDLKNIRRADAKTDLNELEKVLSKDIEMARKRLDRVLVPDDVKARYIANLNRL 239
            + + +  D++ +   D +    EL +++ K  E      D  LV  +V+  Y  N N  
Sbjct: 147 -LIAKVINDVEAMPATDERRF--ELYRIILKAKE------DVALVRYEVRG-YTGNPNSA 196

Query: 240 QELALG---QNGL--LATMRKA---------QQLENALLIQNQQVDASLASSLA---KLD 282
            E A     +N L  + T+  A         +QLE AL+   + V    AS+ A    + 
Sbjct: 197 TEQAATRQLENALKSIETLNGAFGPSYADTIKQLETALIAYRRSVQNFTASNQAIGKAVQ 256

Query: 283 DMAKYAGSIAQQS-RMLADAAVS----SANFWIMAVSAISAAVALVIGYTTA----RSIQ 333
           D      +I + +  M A   VS    SA   I+ +S    A+A+++G   A    R I 
Sbjct: 257 DTIDLGETITRLTDEMYASQLVSLGDESAQSRILQLSC--TALAMLLGILAAMIITRQIT 314

Query: 334 KPLQKINHELAYMARGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVN 393
           +PLQ     +  +A GD+T+        E G L + I  +     +L+  I  G   + +
Sbjct: 315 RPLQDTLAVVDRIAAGDLTQGTVVTRGDELGVLQQGIQRMGTTLRDLIGGIRDGVTQIAS 374

Query: 394 EASRSAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQ 453
            A   + ++E+  A V  QK++TDQVA A+ E+  +  EVAR+ + A      ADA+A+ 
Sbjct: 375 AAEELSAVTEQTSAGVNSQKTETDQVATAMQEMSATVHEVARNAEQACTVASEADAQARI 434

Query: 454 GRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIE 513
           G Q VA      E+LAS++  +V    +L + S  IG I+DVIR +AEQTNLLALNAAIE
Sbjct: 435 GDQVVAQAIVQIERLASEVGRSVDAMDELEQESARIGKIMDVIRAVAEQTNLLALNAAIE 494

Query: 514 AARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRAC 573
           AARAGDAGRGFAVVADEVR LA RTQ STEEI+ ++  LQ  ++QV  +M  S+E T + 
Sbjct: 495 AARAGDAGRGFAVVADEVRGLAQRTQHSTEEIESLVAGLQNGTRQVSSIMRNSRELTDSS 554

Query: 574 VEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREA 633
           VE   +   +L +I   +  I+ M  Q+A AA +Q  V++ ++  +  + +V+ +T   +
Sbjct: 555 VELAGKAGISLGNITQAVSGIQAMNQQIAAAAVQQSSVAEEISRSILNVRDVSEQTASAS 614

Query: 634 RESASSSEVLADLAAKQQQLIAHFKV 659
            E+A+SS  LA L  + QQL++HFKV
Sbjct: 615 EETAASSIELARLGNQLQQLVSHFKV 640