Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  202 bits (513), Expect = 5e-56
 Identities = 131/386 (33%), Positives = 211/386 (54%), Gaps = 4/386 (1%)

Query: 276 SSLAKLDDMAKYAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKP 335
           S +  L  ++ Y G    +++  A  A    +  + A++A+   + L++G    R + +P
Sbjct: 246 SRVQGLPSVSWYVGISLDKAKAYAALASFRTSAVVAALTAVGV-ILLLLGMLM-RVLMRP 303

Query: 336 LQKINHELAYMARG--DMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVN 393
           L  +   +A +A G  D+TRR+   ++ EFG L+ + +   ++    + ++++ ++ +  
Sbjct: 304 LTDMGRAMANIAEGEGDLTRRLAVQSKDEFGELASAFNRFVERIHTSIREVSSATQQVNE 363

Query: 394 EASRSAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQ 453
            A+R    S  +MA   EQ S+T+ VAAAI EL  +A E+AR+   A  +   A  +A+ 
Sbjct: 364 VAARVLAASNSSMANSDEQASRTNSVAAAINELGAAAQEIARNAADASQQASGARHQAED 423

Query: 454 GRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIE 513
           GRQ V        +L++ + ++      L   + +IG IL+VI+GI+EQTNLLALNAAIE
Sbjct: 424 GRQVVEQNIAAMRELSAKISASCAQIEALNAKTVDIGQILEVIKGISEQTNLLALNAAIE 483

Query: 514 AARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRAC 573
           AARAG+AGRGFAVVADEVR LA RTQ+S +EIQ MIE LQ  +   V+ M  SQ Q+ + 
Sbjct: 484 AARAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQMIEQLQVGAGASVQTMTESQRQSESS 543

Query: 574 VEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREA 633
           V         L  +  R+G I  M   VA A +EQ  V +S+   +T I  +  +     
Sbjct: 544 VSIADRAGERLGEVTQRIGEIDGMNQSVATATEEQTAVIESLNMDITEINTLNQQGVENL 603

Query: 634 RESASSSEVLADLAAKQQQLIAHFKV 659
           + +  +   L   A + +QL+  F++
Sbjct: 604 QSTLRACGDLDQQARRLKQLVDSFRI 629