Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  228 bits (582), Expect = 6e-64
 Identities = 143/366 (39%), Positives = 218/366 (59%), Gaps = 3/366 (0%)

Query: 297 MLADAAVSSANFWIMAVSAISAAVA-LVIGYTTARSIQKPLQKINHELAYMARG--DMTR 353
           M+A    S +N   M V  +  A A L+  +  +R I +PL+ +   L  +++G  D+T+
Sbjct: 344 MVALGEESRSNLAAMLVIGMLIAFAGLLAIWLISRRITRPLRDMVVMLDNISQGEGDLTQ 403

Query: 354 RINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQK 413
           R+N  +R E G ++   +    +   ++S++ +  + + + +  +A+I+ R    VQ Q 
Sbjct: 404 RLNIDSRNELGQIAAGFNAFLARLQGMISEVVSSVQKVSDASEHTADIAIRTDKGVQTQL 463

Query: 414 SQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDME 473
           ++ + VA A+ E+  +A +VAR+   A +  + AD  A QGR  V  T     +LAS++ 
Sbjct: 464 AEIELVATAVHEMTATAQDVARNATQAAEAANNADRAANQGRHIVQDTGATIAELASEIG 523

Query: 474 SAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRA 533
            AV +   L   S NI +IL  IR IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR 
Sbjct: 524 RAVDVVQTLARDSENIDAILVTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRN 583

Query: 534 LATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGA 593
           LA +TQ +T EIQ MI+ LQ  ++ VV+VM +SQ +TR  VEQ      ALQ+I   +  
Sbjct: 584 LAQKTQQATGEIQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQADAAAEALQAITQAVSL 643

Query: 594 IKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQL 653
           I +M +Q+A AA+EQ  V++ +  +VT I +VA +    A E++ +S  L  LA +Q++L
Sbjct: 644 INDMNNQIASAAEEQSAVAEDINRNVTNIGQVAQQVAAGADEASQASAGLTRLAEQQRRL 703

Query: 654 IAHFKV 659
           I  F+V
Sbjct: 704 INQFRV 709