Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  206 bits (525), Expect = 2e-57
 Identities = 134/371 (36%), Positives = 203/371 (54%), Gaps = 8/371 (2%)

Query: 294 QSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARGD--M 351
           ++R +  A + S    ++  + +   +   +    + +I +PL +I   L  MA+GD  +
Sbjct: 194 EARAVFQARIDSLTLIMLGSALLLLILMAGLAVLMSNAILRPLLQIKQNLDDMAQGDGDL 253

Query: 352 TRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHL---VNEASRSAEISERAMAR 408
           T R+   +R E G LS S +   +K   L+ Q+   +  L   V   +  A+ SE+AMA 
Sbjct: 254 THRLPITSRDELGELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAVASQAQRSEQAMA- 312

Query: 409 VQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQL 468
             +Q+S+TDQVA AI E+  +A EVA S   A +     D +    +Q V  + R   +L
Sbjct: 313 --DQRSETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHEL 370

Query: 469 ASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVA 528
             ++  +      L +    I  +LDVIR IAEQTNLLALNAAIEAARAG+AGRGFAVVA
Sbjct: 371 VGELRGSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVA 430

Query: 529 DEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIA 588
           DEVRALA+RTQ ST EIQ MI+ LQ ++   V  M R+ E+  +      +   +L +I+
Sbjct: 431 DEVRALASRTQQSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAGESLDAIS 490

Query: 589 DRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAA 648
             +G I  M  Q+A AA+EQ  V++ +   V  IA+       +A + A ++  L  LA 
Sbjct: 491 ALIGTINSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTARELNGLAE 550

Query: 649 KQQQLIAHFKV 659
           + Q+L+  F++
Sbjct: 551 QLQRLVGQFRI 561