Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  225 bits (573), Expect = 6e-63
 Identities = 180/620 (29%), Positives = 307/620 (49%), Gaps = 45/620 (7%)

Query: 67  LEFRTSEEAGELPQLSNKFKDQQARFRQLSQQMNALTDSTESQKQFQDVLQATNQFYSQA 126
           L +RT +  G++ +LS+   + +     +++    LTD  E+  Q  ++    + F +Q 
Sbjct: 39  LIYRT-DRIGDITRLSDNLTNLR-----VARLQYMLTDGDETAAQ--NMQSKLDVFKAQQ 90

Query: 127 DQVLTQHSEWVNALAQR------RKLEIAFIRLEDTYQWAADLLLQQSSGQRSMRNKAEL 180
             +L   +  VN    R      R  E +   +   YQ  A +  + ++   +     E 
Sbjct: 91  QSLLVSFNNPVNLKPLRELADVTRDYEASLNSMRAVYQAGAKVRNEMTANGTAAMQAVES 150

Query: 181 ITSGIARDLKNIRRAD-AKTDLNELEKVLSKDIEMARKRLDRVLVPDDVKARY------- 232
           + + + +    I  AD A+ DL +L     +D+ + R  +       + K          
Sbjct: 151 LNNAVLQ----IDPADPARFDLAQLANSARQDLVLVRYEVRGYTGNPNDKTETAAFQQLD 206

Query: 233 --IANLNRLQELALGQNGLLATMRKAQQLENALLIQNQQVD---ASLASSLAKLDDMAKY 287
             I++L+R +  A G     A   +  Q E+AL      VD   A+  ++ +   D+   
Sbjct: 207 SAISHLDRFKA-AFGP----ANREQIAQFESALRNYRSSVDVFKATTQTAASVRKDLTTQ 261

Query: 288 AGSIAQ--------QSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKI 339
             +I +        Q +M  +    + +  I  V  +   + ++      R I +PL+  
Sbjct: 262 GATIVKLGEELYGLQMQMGKEDTAHARSLQIGCVVLVML-LGILAAVIITRQITRPLRDT 320

Query: 340 NHELAYMARGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSA 399
              +  +A GD+T       R E G L + I  +     EL+S I  G   + + A   +
Sbjct: 321 LAIVERIASGDLTHTEAVTRRDELGVLQQGIQRMGTTLRELISGIRDGVTQIASAAEELS 380

Query: 400 EISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVA 459
            ++E+  A V  QK +TDQVA A+ E+  +  EVAR+ + A      AD +A+ G + V 
Sbjct: 381 AVTEQTSAGVNSQKVETDQVATAMHEMSATVHEVARNAEQASVAASDADQQARDGDKVVG 440

Query: 460 TTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGD 519
              +  E+LA+++  +    + L + S+ IG ++DVI+ +AEQTNLLALNAAIEAARAG+
Sbjct: 441 EAIQQIERLAAEVVRSSDAMNVLEQDSDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGE 500

Query: 520 AGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTRE 579
           AGRGFAVVADEVR LA RTQ STEEI+ ++  LQ  ++QV  +M  S+  T + VE TR 
Sbjct: 501 AGRGFAVVADEVRGLAQRTQQSTEEIEGLVAALQNGTRQVSGIMLGSRTLTDSSVELTRR 560

Query: 580 MDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASS 639
             ++L+SI   + +I+ M  Q+A AA++Q  V+  ++  +  + +V+ +T   + E+A+S
Sbjct: 561 AGTSLESITRTVSSIQAMNQQIAAAAEQQSSVADEISRSIVNVRDVSEQTAEASEETAAS 620

Query: 640 SEVLADLAAKQQQLIAHFKV 659
           S  LA L  + Q +++HF+V
Sbjct: 621 SVELARLGGQLQMMVSHFRV 640