Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  202 bits (515), Expect = 2e-56
 Identities = 132/417 (31%), Positives = 218/417 (52%), Gaps = 3/417 (0%)

Query: 243 ALGQNGLLATMRKAQQLENALLIQNQQVDASLASSLAKLDDMAKYAGSIAQQSRMLADAA 302
           AL ++  LA+   +  L   LL+  +Q+   +  S  +L D+A +  +        A A 
Sbjct: 128 ALDRSFALASQGDSVGLNKLLLVDMKQI---VDGSGKQLGDLADFYLTQVDAEGKSAGAQ 184

Query: 303 VSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARGDMTRRINYPTRCE 362
              +   ++    I+A   + +     RSI  PLQ+       +A GD+T  I      E
Sbjct: 185 YDKSRDIVIIFVVIAALCTIGLALWLTRSIVGPLQRAVTAAEQVANGDLTHTIEVDGEDE 244

Query: 363 FGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQVAAA 422
              L R++ ++     E +  I + +  L + A+    ++E +   + +Q ++ DQ A A
Sbjct: 245 VTRLLRALAMMQVNLREAMRHIGSSATQLASAATELNSVTEDSYRGLNQQNAEIDQAATA 304

Query: 423 ITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKL 482
           I E+  +  EVAR+     D  +++   A  G+ +V  T +  + L  ++++   +   L
Sbjct: 305 INEMTSAVEEVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQTLTDNVQATSTLVQNL 364

Query: 483 GEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTST 542
              S +IG +LDVIR IAEQTNLLALNAAIEAARAG++GRGFAVVADEVRALA RTQ ST
Sbjct: 365 ANQSQDIGKVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAHRTQQST 424

Query: 543 EEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVA 602
            EI  M+  ++  S Q ++ M  S+ +  + +   +    +L  I   +  I E    +A
Sbjct: 425 LEIDSMVSAMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSINQISERNLVIA 484

Query: 603 HAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFKV 659
            AA+EQ  VS+ V  ++  I +++ ++ + A + ++SS  L+ LAA   Q+++ FKV
Sbjct: 485 SAAEEQAQVSREVDRNIVNIRDLSMQSTQGANQISASSHELSRLAADLNQVVSRFKV 541