Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  210 bits (535), Expect = 1e-58
 Identities = 130/399 (32%), Positives = 216/399 (54%), Gaps = 7/399 (1%)

Query: 263 LLIQNQQVDASLASSLAKLDDMAK--YAGSIAQQSRMLADAAVSSANFWIMAVSAISAAV 320
           L+ QN Q+  SL      +   A+   AG +   ++   D+AV+     ++ V+ I   +
Sbjct: 249 LMQQNDQIRDSLRQQSMDIVTSAEKLMAGQVVSANKE-KDSAVTQ----LLTVAVIVLLL 303

Query: 321 ALVIGYTTARSIQKPLQKINHELAYMARGDMTRRINYPTRCEFGALSRSIDILADKTGEL 380
            +       R I +PL         +A GD+T  ++   + E G L  ++  +      L
Sbjct: 304 GIFAAILITRQITRPLDSTVIAARRIADGDLTNDLSTTRQDELGLLQNTMQHMTVSLRTL 363

Query: 381 LSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGA 440
           +  I+ G   +   A   + +SE+  A V +QK + DQVA A+ ++  +  EVA++T+ A
Sbjct: 364 IGGISNGVTQIATAAEELSAVSEQTSAGVTQQKLEVDQVATAMNQMASTVQEVAQNTEDA 423

Query: 441 KDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIA 500
                +A   A  G   V    R   QLA ++        +L + S+ IG ++DVI+ +A
Sbjct: 424 SQAARQASDRAAHGSSVVQHATREISQLAGEVGQLGEAMQRLIQDSDKIGGVIDVIKAVA 483

Query: 501 EQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVV 560
           EQTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA RTQ+ST EI+ +I++LQ+ +    
Sbjct: 484 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQSSTTEIEALIKSLQDGTGAAS 543

Query: 561 EVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVT 620
           E+M  S+++T   V   R+ + +L  I   +  I++M+ Q++ AA+EQ  V+  +   V 
Sbjct: 544 ELMNASRQRTEGTVALARQAEESLLEITHSIVTIEQMSQQISAAAEEQSAVTDEINRSVI 603

Query: 621 GIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFKV 659
            + ++A ++     +SA+S+  LA L +  Q ++A F++
Sbjct: 604 SVRDIADQSATATEQSAASTVELARLGSNLQDMVARFRI 642