Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  231 bits (589), Expect = 8e-65
 Identities = 145/390 (37%), Positives = 222/390 (56%), Gaps = 11/390 (2%)

Query: 277 SLAKLDDMAKYAGSIAQQSRMLADAAVSSAN---FWIMAVSAISAAVALVIGYTTARSIQ 333
           S A++D MA     + Q    LA  A SSA    +  +A+  +   V L +     R+I+
Sbjct: 267 STARIDMMANVEAELGQNVVGLATDARSSAQSSLYVAVAIVVLMLIVVLWLASVIIRNIK 326

Query: 334 KPLQKINHELAYMARGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVN 393
             +  +N  L  ++  D+T R  Y  + EFG +SR++D +A +  E++S+I + +  +  
Sbjct: 327 VAVVDVNRTLMALSTRDLTARTRYIGKDEFGEISRNLDNMAHQISEVISEIGSATAQVAT 386

Query: 394 EASRSAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQ 453
            A +S+ ++ +    V +Q+  TDQVA AI+E+  +  +VARST  A +   R ++   Q
Sbjct: 387 AAEQSSAVALQTNQNVAQQRQGTDQVATAISEMSATVKDVARSTTDAAEMSQRVNSSTVQ 446

Query: 454 GRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIE 513
           G+ ++  T  + ++L+   E    I  +L   SN+I S+LDVIRG+A+QTNLLALNAAIE
Sbjct: 447 GKTEIDNTIGLIQELSVQAEETSRIIDELKGESNSISSVLDVIRGVADQTNLLALNAAIE 506

Query: 514 AARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVV----EVMGRSQEQ 569
           AARAG+ GRGFAVVADEVR LA +TQ ST  IQ MI NLQ  S++      E +G++QE 
Sbjct: 507 AARAGEQGRGFAVVADEVRNLAKKTQDSTVSIQKMIANLQSGSERAAASMQETLGKAQEG 566

Query: 570 TRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHET 629
               V         L+ IA+ +  I +   QVA AA+EQ +V++ +  +V  I  +  + 
Sbjct: 567 ASNVV----RAGELLEEIAEGIATISDRNIQVASAAEEQSLVAEEIHRNVDDINSLVIQV 622

Query: 630 EREARESASSSEVLADLAAKQQQLIAHFKV 659
              A ++A +S  LA LA +QQ L+  FKV
Sbjct: 623 SAGAEQTAVTSRELARLAEQQQGLVGRFKV 652