Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  223 bits (569), Expect = 2e-62
 Identities = 167/570 (29%), Positives = 282/570 (49%), Gaps = 31/570 (5%)

Query: 90  ARFRQLSQQMNALTDSTESQKQFQDVLQATNQFYSQADQVLTQHSEWVNALAQRRKLEIA 149
           A+ R++ +Q+  L       KQ  D L   NQ   +A + + + S+ V+A  +     + 
Sbjct: 143 AKLREIKEQVGGL-------KQTFDQLVGINQKVDEALKPIIKVSDDVSATFEN----LL 191

Query: 150 FIRLEDTYQWAADLLLQQSSGQRSMRNKAELITSGIARDLKNIRRADAKTDLNELEKVLS 209
              ++DT +   +  ++Q      +RN          R L ++  AD +    +    L 
Sbjct: 192 NKTIDDTLRAPNETGIRQVKIAGDLRNGMTNFRLVFRRYL-SVPNADNRQATYKAADALI 250

Query: 210 KDIEMARKRLDRVLVPDDVKARYIANLNRLQELALGQNGLLATMRKAQQLENALLIQNQQ 269
             ++ AR +L     P +  A   A L  L++  +    +   +++ +Q+ N L  Q Q 
Sbjct: 251 AQVDAARSQL-----PVEANAAVDAALVALKQYKVLMTSISDMLQQTEQIRNDL--QQQS 303

Query: 270 VDASLASSLAKLDDMAKYAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTA 329
           V     ++ A+ DD+A      A++ +  A          +++V+ +   V +   +   
Sbjct: 304 V-----ATAARADDLAALQVISAKKEQQTAVVQ-------LLSVALVVLLVGIFAAFLIT 351

Query: 330 RSIQKPLQKINHELAYMARGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSR 389
           R I  PL         +A GD+T   +   + E G L  ++  +      L+  I  G  
Sbjct: 352 RQITVPLNSTVIAARRIADGDLTHDSSTTRQDELGLLQNTMQHMTVSLRGLIGGIGNGVT 411

Query: 390 HLVNEASRSAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADA 449
            +   A + + +SE+  A V  QK++ DQVA A+ E+  +  EVAR+T+ A     +A  
Sbjct: 412 QIATAAEQLSAVSEQTSAGVTLQKNEVDQVATAMNEMASTVQEVARNTEDASQAAKQASE 471

Query: 450 EAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALN 509
            A  G   V    R   QLA +++       +L E S  IGS++DVI+ +AEQTNLLALN
Sbjct: 472 RAAHGSSVVQHATREIGQLAGEVQQLGEAMQRLTEDSGKIGSVIDVIKAVAEQTNLLALN 531

Query: 510 AAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQ 569
           AAIEAARAG+ GRGFAVVADEVR+LA RTQ ST EI+ +I+ LQ+ +     +M  S ++
Sbjct: 532 AAIEAARAGEQGRGFAVVADEVRSLAQRTQNSTTEIEALIQALQKGTGAASGLMDASLQR 591

Query: 570 TRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHET 629
           T   V   R+ + AL  I   +G I++M+ Q++ AA++Q  V++ +   V  + ++A ++
Sbjct: 592 TEGTVVLARQAEQALVEINQSIGTIEQMSQQISAAAEQQSAVTEEINRSVLSVRDIADQS 651

Query: 630 EREARESASSSEVLADLAAKQQQLIAHFKV 659
                +SA+S+  LA L +  Q ++A FK+
Sbjct: 652 ASATEQSAASTVELARLGSDLQSMVARFKI 681