Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  196 bits (498), Expect = 3e-54
 Identities = 122/352 (34%), Positives = 196/352 (55%), Gaps = 7/352 (1%)

Query: 310 IMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARG--DMTRRINYPTRCEFGALS 367
           ++AV+ I+  ++L+I     R++ +PL  +   +  +A+G  D+TRR++   + EF AL 
Sbjct: 280 LIAVAVIALLLSLLI-----RALMRPLTDMGRAMQDIAQGEGDLTRRLSIQGKDEFAALG 334

Query: 368 RSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQVAAAITELE 427
            S +   ++    + ++++ +  + + + R    S  ++    EQ ++T+ VAAAI EL 
Sbjct: 335 GSFNQFVERVHASIVEVSSATLQVHDLSQRVVNSSNSSIVGFDEQSARTNNVAAAINELG 394

Query: 428 VSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSN 487
            +  E+AR+   A  +   A  +A+ G+  V  T      L++ +  +     +L   + 
Sbjct: 395 AATQEIARNASDASIQASEARNQAEDGQVVVEKTIHAMSALSAKISDSCTQIEQLNASTE 454

Query: 488 NIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQH 547
           NIG ILDVI+GI++QTNLLALNAAIEAARAG+AGRGFAVVADEVR LA RTQTS +EI  
Sbjct: 455 NIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQTSADEIHK 514

Query: 548 MIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQE 607
           MI +LQ  S+  V  M  SQ  ++  VE   +  S L+ +  R+G I  M   VA A +E
Sbjct: 515 MIGSLQSGSQHAVLNMNESQTSSQESVEVANQAGSRLRDVTRRIGDIDGMNQSVAAATEE 574

Query: 608 QIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFKV 659
           Q  V +++   +  I  +  +      E+      L+  A + +QL+  FK+
Sbjct: 575 QTAVVETLNIDINQINTLNQQGVANLNETLKDCAALSQQAGRLKQLVDSFKI 626