Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  202 bits (515), Expect = 3e-56
 Identities = 141/472 (29%), Positives = 242/472 (51%), Gaps = 35/472 (7%)

Query: 190 KNIRRADAKTDLNELEKVLSKDIEMARKRLDRVLVPDDVKARYIANLNRLQELALG-QNG 248
           + +R  D+  D ++L   ++ +I    K         D +  + A +N+ +E  LG ++G
Sbjct: 182 QTLRSFDSTLDGSDLSPDVADEIRRLMK---------DYQMNFEALVNKEKEFGLGKEDG 232

Query: 249 LLATMRKAQQLENALLIQNQQVDASLASSLAKLDDMAKYAGSIAQQSRMLADAAVSSANF 308
            +  +R       +++ Q++Q    L   LA  +   +   S+A  + + A         
Sbjct: 233 KMGALR-------SVIDQSEQATQELRE-LALHEIHDEEGDSVAMATTLFA--------- 275

Query: 309 WIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARG-DMTRRINYPTRCEFGALS 367
                  + A +  ++ +   R+I  P+  IN  ++++ +  ++T R +     E   + 
Sbjct: 276 -------VIAVLVAIVTFMIIRAIITPINNINQVISHVGKDKNLTLRCDTQGGDEIAEIG 328

Query: 368 RSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQVAAAITELE 427
           +  + + +    L+ Q+N     +       +  + +A   V  Q ++TD VA AITE+ 
Sbjct: 329 QHFNEMVESFRALIQQVNDAVNVMNESCQELSANATQASDGVLRQLNETDMVATAITEMG 388

Query: 428 VSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSN 487
            +  E+A++T+ A +  +     A+ G+Q V  T    + LA  + ++  +  +L   S 
Sbjct: 389 ATIDEIAKNTELAAERANHTHTNAQVGQQSVEQTIEKIQSLAQQLNNSASVVAELERDSG 448

Query: 488 NIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQH 547
            IGS+LDVIRGIAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA RTQ STEEI  
Sbjct: 449 TIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAG 508

Query: 548 MIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQE 607
           +I+ LQ  ++ +V++M  SQ Q     EQ     + L  I   +  I +M+ Q+A A +E
Sbjct: 509 IIQTLQSRTRSIVQLMEASQRQGGESAEQAASAGTMLAQINQDVTNIMDMSTQIAAAIEE 568

Query: 608 QIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFKV 659
           Q  V+  V  +V  I ++A E+   A  +A +S+ + + A   Q+ ++ F+V
Sbjct: 569 QSSVAAEVNKNVVVIRDIAEESSHAAMANAKASDDVRERAEYLQRAVSQFRV 620