Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  202 bits (513), Expect = 5e-56
 Identities = 155/477 (32%), Positives = 246/477 (51%), Gaps = 30/477 (6%)

Query: 193 RRADAKTDLNELEKVLS-----KDIEMARKRLDRVLVPDDVKARYIANLNRLQELALGQN 247
           R  D K  L EL  +       K +E A    D+V   D  + +Y   L  +  +   QN
Sbjct: 193 REEDYKRALQELSALDGTINGLKSVESATVIADKVEGIDTGRTQYRDALKAVYGIIQNQN 252

Query: 248 GLLATMRKAQQLENALLIQNQQVDASLASSLAKLDDMAKYAGSIAQQ-SRMLADAAVSSA 306
           G         +++  L +   +V A L      ++      G  AQQ S    D  V   
Sbjct: 253 G---------RIDEGLNVIGPKVAAVLQEYNKAIEQQQGELGLYAQQKSENAIDTVV--- 300

Query: 307 NFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMAR----GDMTRRINYPTRCE 362
              ++A++A+  A+ L I  T  R+I++P+     E+A +AR    G++ +  N+     
Sbjct: 301 ---VVAIAAMLMAIWLAI--TVVRAIRRPVGGEPREIASIAREIAGGNLGQ--NFLREGS 353

Query: 363 FGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQVAAA 422
            G  +   + + D    ++S++N  SR L + +S    ++E +    + Q  Q    A+A
Sbjct: 354 TGIYAAMAE-MNDNLRRIVSELNDASRTLGDSSSGMLGVTEESRKNSESQADQLAHTASA 412

Query: 423 ITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKL 482
           + E+  +  ++AR+   A +    AD  A++G   V  TRR    L  ++    GI   L
Sbjct: 413 MQEMTHTVDDIARNAQRASEMASEADHHAQEGMGVVEDTRRSIMVLVDNITDVSGIIENL 472

Query: 483 GEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTST 542
            + + N+GSILDVIRGIAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA+RTQ ST
Sbjct: 473 EKETENVGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQNST 532

Query: 543 EEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVA 602
           EEIQ +I  LQ  S++ VE M  +  +     E+  +  +AL +IAD + AI++M  Q+A
Sbjct: 533 EEIQALIGRLQAESRRSVESMRVNVTEATQTSEKANKAIAALGAIADSVMAIRDMNHQIA 592

Query: 603 HAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFKV 659
            AA+EQ  V  ++   V  I+ +A      + +  +S+  ++++++K   ++  FK+
Sbjct: 593 VAAEEQATVVGTINVSVEEISGLARMNAAGSEQVQNSANGISEISSKLSGIVGRFKL 649