Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 705 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  202 bits (513), Expect = 6e-56
 Identities = 133/388 (34%), Positives = 205/388 (52%), Gaps = 7/388 (1%)

Query: 273 SLASSLAKLDDMAKYAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSI 332
           SL   +AK D    Y  + A    M A A  SS    ++ V  I + +A+V      RSI
Sbjct: 322 SLVIEVAKAD---AYQAANAMDKAMSAMA--SSLGSLLLIVGVIVSLIAVVTISLVIRSI 376

Query: 333 QKPLQKINHELAYMA--RGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRH 390
             PL+ I   +  +A   GD+T+++   +  E  AL   I+   +K   L+ ++   +  
Sbjct: 377 VAPLKVIQSRVENLASAEGDLTQQVTVESHAELIALGGGINGFINKLRLLIGELKELASR 436

Query: 391 LVNEASRSAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAE 450
              E+  +AEI+++    V  Q S  + V  A+ E+  +A EVA++++    E +     
Sbjct: 437 SQAESQVAAEIAQQTHNSVNRQYSDIESVVTAVNEMSATALEVAKASEQTASETEAMTLN 496

Query: 451 AKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNA 510
            K G   ++        ++ +   A     K+ E S NI  IL+VI  IAEQTNLLALNA
Sbjct: 497 VKAGEDSLSQAMGYVTHMSQESLLAKEAVGKVAESSTNISKILEVISAIAEQTNLLALNA 556

Query: 511 AIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQT 570
           AIEAARAG+ GRGFAVVADEVRALA++TQ+ST+EI  +IE LQ       +++ +  +  
Sbjct: 557 AIEAARAGEQGRGFAVVADEVRALASKTQSSTDEIGKLIEALQREVNSASQIIDQGVDGA 616

Query: 571 RACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETE 630
           +  V QT    S+L +I +++  +      +A AA+EQ  V++ V+ ++TGI++ A E  
Sbjct: 617 QRAVAQTESALSSLNTIVNQIQEVSSQVTHIATAAEEQSAVTEEVSRNITGISDSASELA 676

Query: 631 REARESASSSEVLADLAAKQQQLIAHFK 658
           R A E+  SS  LA L  +Q Q +   K
Sbjct: 677 RLADEAQQSSASLAGLVEQQHQQLGKLK 704