Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  214 bits (546), Expect = 7e-60
 Identities = 142/447 (31%), Positives = 238/447 (53%), Gaps = 8/447 (1%)

Query: 219 LDRVLVPDDVKARYIANLNRLQELA--LGQNGLLATMRKAQQLENALLIQNQQVDASLAS 276
           +D  ++  D+     A +NRL  L   + Q G    ++   Q E      NQ +   +  
Sbjct: 128 IDNQILASDLADDERAEVNRLVSLLDKVTQEGFNPAIQALSQGEYKR--SNQLLLEKINP 185

Query: 277 SLAKLDDMAK-YAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTA---RSI 332
               + D A+ +      +++    A+  + + +I  V+  S    L I  ++    R +
Sbjct: 186 LFKDITDQAQAFLDMQIAEAKTSYQASQETVSLYIWLVAIFSGVAMLAISVSSVFIIRRV 245

Query: 333 QKPLQKINHELAYMARGDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLV 392
              + ++      +A GD+T+RI      EF  ++  ++ +A    + ++  +A +  L 
Sbjct: 246 SLSVVQLEETAVDIAAGDLTKRIRLGGHDEFAHIAEHVNRIASDFQQAVTNTHASTSRLA 305

Query: 393 NEASRSAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAK 452
           + A  +A +S +    V +Q+ QT  +A AI E   +  EVA+S   A      A+  A 
Sbjct: 306 SAAEENAVVSTQTQRNVLDQQQQTQLIATAIHEFTATVREVAQSAASAATASQDANGAAH 365

Query: 453 QGRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAI 512
             +  V  +  + E LA ++  A      L + SN IG+++DVI+ I+EQTNLLALNAAI
Sbjct: 366 GAQGVVDESIAVIEALAQELSRASEAMTLLAQHSNEIGTVVDVIQAISEQTNLLALNAAI 425

Query: 513 EAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRA 572
           EAARAG+ GRGFAVVADEVR+LA RTQ STEEIQ MI+ LQ+ ++  +++M    EQ + 
Sbjct: 426 EAARAGEQGRGFAVVADEVRSLAKRTQDSTEEIQKMIQRLQQGARDSMQMMQSGTEQVKL 485

Query: 573 CVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETERE 632
            V+++  +  ALQ I + +  I  +  Q+A A++EQ  V++ +  ++T I+E++ +T   
Sbjct: 486 SVDKSLMVRDALQQILNSIEEINALNAQIATASEEQSSVTEEININITNISEISDQTAEG 545

Query: 633 ARESASSSEVLADLAAKQQQLIAHFKV 659
           AR+S+ ++E LA LA   +  IAH+KV
Sbjct: 546 ARQSSDATEDLARLAESMEADIAHYKV 572