Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  192 bits (489), Expect = 3e-53
 Identities = 121/355 (34%), Positives = 191/355 (53%), Gaps = 8/355 (2%)

Query: 310 IMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARG--DMTRRINYPTRCEFGALS 367
           I+  + +  A+  V+    A+ +  P+  +   L  +A+G  D+T+R++     E   L 
Sbjct: 203 ILLFALVLVAITAVVMLVAAQRMVNPIHNMVQNLEDIAKGEGDLTKRLDVQGSDEIAMLG 262

Query: 368 RSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQE---QKSQTDQVAAAIT 424
           R+ +   DK   ++  +   +R  V   S +  IS +  A  Q+     ++TDQV  AIT
Sbjct: 263 RAFNQFVDKLQGIIKDV---ARATVEVKSGADNISSQTAAMAQQLISHNNETDQVVTAIT 319

Query: 425 ELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKLGE 484
           E+  +A+EVA ST    +    A  +    ++ V ++      L ++++ A G  + L E
Sbjct: 320 EMSATASEVAMSTTQVAEATQAATQDVGNAQECVDSSLHEVSTLMAEIDMAAGHINSLNE 379

Query: 485 FSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEE 544
            S  I S+L VI GIAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA+RTQ ST E
Sbjct: 380 QSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASTLE 439

Query: 545 IQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVAHA 604
           I  M+  L       V  M  SQ+     V  +R +  +L ++   + +I +M+ Q+A A
Sbjct: 440 INEMLSELHNLVSLAVSSMESSQQSCHRSVTSSRAISDSLGAVTSAVTSINDMSTQIATA 499

Query: 605 AQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHFKV 659
           A EQ  V++ +  +V  I E+ +E  + +  ++ +S+ LA+       L+  FKV
Sbjct: 500 ATEQSSVTEEINRNVFAIQEIVNELLQASNSASDTSQGLANEGRNLDTLVGQFKV 554